README.md
=========

.. code-block:: none

	These Brian scripts reproduce the figures from the following preprint:
	
	Modeling neuron-glia interactions with the Brian 2 simulator
	Marcel Stimberg, Dan F. M. Goodman, Romain Brette, Maurizio De Pittà
	bioRxiv 198366; doi: https://doi.org/10.1101/198366
	
	Each file can be run individually to reproduce the respective figure. Note that
	most files use the [standalone mode](http://brian2.readthedocs.io/en/stable/user/computation.html#standalone-code-generation)
	for faster simulation. If your setup does not support this mode, you can instead
	fallback to the runtime mode by removing the `set_device('cpp_standalone)` line.
	
	Note that example 6 ("recurrent neuron-glial network") takes a relatively long
	time (~15min on a reasonably fast desktop machine) to run.