spatialneuron package

morphology module

Neuronal morphology module. This module defines classes to load and build neuronal morphologies.

Exported members: Morphology, MorphologyData, Cylinder, Soma


Cylinder(*args, **kwds) A cylinder.
Morphology([filename, n]) Neuronal morphology (=tree of branches).
MorphologyIndexWrapper(morphology) A simpler version of IndexWrapper, not allowing for string indexing (Morphology is not a Group).
Soma(*args, **kwds) A spherical soma.

spatialneuron module

Compartmental models. This module defines the SpatialNeuron class, which defines multicompartmental models.

Exported members: SpatialNeuron


SpatialNeuron([morphology, model, ...]) A single neuron with a morphology and possibly many compartments.
SpatialStateUpdater(group, method, clock[, ...]) The CodeRunner that updates the state variables of a SpatialNeuron at every timestep.
SpatialSubgroup(source, start, stop, morphology) A subgroup of a SpatialNeuron.